Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | D5071_16825 | Not Available | Negative | 3711664 - 3714186 | 93610.6 |
| glutaredoxin 2 | D5071_16840 | Not Available | Negative | 3716583 - 3717218 | 23618.9 |
| lysr family transcriptional regulator | D5071_16845 | Not Available | Positive | 3717434 - 3718315 | 31934.7 |
| mfs transporter | D5071_16850 | Not Available | Positive | 3718431 - 3719651 | 42109.6 |
| ggdef domain-containing protein | D5071_16855 | Not Available | Negative | 3719896 - 3721494 | 58989.4 |
| marc family naat transporter | D5071_16860 | Not Available | Negative | 3721674 - 3722348 | 24132.4 |
| srpbcc family protein | D5071_16865 | Not Available | Negative | 3722431 - 3722919 | 18497.2 |
| hypothetical protein | D5071_16870 | Not Available | Positive | 3723399 - 3723734 | 13285.4 |
| nicotinamide-nucleotide amidase | D5071_16875 | Not Available | Positive | 3723958 - 3724452 | 17465.7 |
| recombinase reca | D5071_16880 | Not Available | Positive | 3724560 - 3725633 | 38282.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
