Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptosyltransferase rfaq | D5071_01120 | Not Available | Positive | 226384 - 227454 | 40908.4 |
| glycosyltransferase family 1 protein | D5071_01125 | Not Available | Positive | 227451 - 228566 | 42130.1 |
| lipopolysaccharide 3-alpha-galactosyltransferase | D5071_01130 | Not Available | Positive | 228644 - 229660 | 39243.8 |
| hypothetical protein | D5071_01135 | Not Available | Positive | 229719 - 230672 | 37417.1 |
| glycosyltransferase | D5071_01140 | Not Available | Positive | 230730 - 231629 | 34411.2 |
| glycosyltransferase family 2 protein | D5071_01145 | Not Available | Positive | 231699 - 232475 | 29862.4 |
| wxcm-like domain-containing protein | D5071_01150 | Not Available | Positive | 232596 - 233000 | 15754.0 |
| n-acetyltransferase | D5071_01155 | Not Available | Positive | 233000 - 233464 | 16804.3 |
| degt/dnrj/eryc1/strs family aminotransferase | D5071_01160 | Not Available | Positive | 233457 - 234557 | 41016.4 |
| glycosyltransferase family 2 protein | D5071_01165 | Not Available | Positive | 234544 - 235608 | 40780.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
