Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prd domain-containing protein | D5071_16510 | Not Available | Negative | 3649642 - 3650481 | 32139.8 |
| glycosyl hydrolase family protein | D5071_16515 | Not Available | Negative | 3650575 - 3652038 | 55698.8 |
| pts beta-glucoside transporter subunit iibca | D5071_16520 | Not Available | Negative | 3652038 - 3653903 | 66222.4 |
| duf1869 domain-containing protein | D5071_16530 | Not Available | Negative | 3655611 - 3655949 | 12357.5 |
| duf1971 domain-containing protein | D5071_16535 | Not Available | Negative | 3655960 - 3656292 | 12618.0 |
| hypothetical protein | D5071_16540 | Not Available | Positive | 3656374 - 3656598 | 8965.31 |
| flavin reductase family protein | D5071_16545 | Not Available | Positive | 3656675 - 3657265 | 21572.5 |
| Trna-lys | Not Available | Not Available | Positive | 3657426 - 3657501 | Not Available |
| d-serine/d-alanine/glycine transporter | D5071_16555 | Not Available | Positive | 3657839 - 3659251 | 51601.6 |
| anti-adapter protein irap | D5071_16560 | Not Available | Negative | 3659423 - 3659689 | 9860.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
