Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_16460 | Not Available | Negative | 3638402 - 3638617 | 7864.44 |
| bifunctional acyl-acp--phospholipid o-acyltransferase/long-chain-fatty-acid--acp ligase | D5071_16465 | Not Available | Positive | 3638616 - 3640787 | 79875.4 |
| lysophospholipid transporter lplt | D5071_16470 | Not Available | Positive | 3640784 - 3642007 | 42577.1 |
| gnat family n-acetyltransferase | D5071_16475 | Not Available | Positive | 3642028 - 3642483 | 16988.2 |
| hypothetical protein | D5071_16480 | Not Available | Negative | 3642676 - 3643626 | 32253.2 |
| myo-inosose-2 dehydratase | D5071_16485 | Not Available | Positive | 3644091 - 3644981 | 32711.8 |
| 5-deoxy-glucuronate isomerase | D5071_16490 | Not Available | Positive | 3645069 - 3645893 | 31234.4 |
| abc transporter atp-binding protein | D5071_16495 | Not Available | Negative | 3645981 - 3646655 | 24357.3 |
| iron abc transporter permease | D5071_16500 | Not Available | Negative | 3646677 - 3648374 | 60609.0 |
| fe(3+) abc transporter substrate-binding protein | D5071_16505 | Not Available | Negative | 3648358 - 3649407 | 37797.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
