Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | D5071_16410 | Not Available | Positive | 3630044 - 3630793 | 28168.2 |
| amino acid permease | D5071_16415 | Not Available | Positive | 3631100 - 3632491 | 50259.8 |
| Trna-arg | Not Available | Not Available | Positive | 3632631 - 3632707 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 3632829 - 3632904 | Not Available |
| pts lactose/cellobiose transporter subunit iia | D5071_16430 | Not Available | Negative | 3633132 - 3633476 | 12715.3 |
| pts sugar transporter subunit iic | D5071_16435 | Not Available | Positive | 3633731 - 3635068 | 48254.9 |
| glycoside hydrolase family 1 protein | D5071_16440 | Not Available | Positive | 3635093 - 3636529 | 56367.5 |
| pts sugar transporter subunit iib | D5071_16445 | Not Available | Positive | 3636559 - 3636876 | 11537.2 |
| fcd domain-containing protein | D5071_16450 | Not Available | Positive | 3636967 - 3637734 | 28818.2 |
| gnat family n-acetyltransferase | D5071_16455 | Not Available | Positive | 3637737 - 3638210 | 18163.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
