Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | D5071_16360 | Not Available | Positive | 3618623 - 3619720 | 40983.7 |
| eca polysaccharide chain length modulation protein | D5071_16365 | Not Available | Positive | 3619742 - 3620788 | 39361.9 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | D5071_16370 | Not Available | Positive | 3620856 - 3621986 | 42037.5 |
| udp-n-acetyl-d-mannosamine dehydrogenase | D5071_16375 | Not Available | Positive | 3622098 - 3623360 | 45564.1 |
| dtdp-glucose 4,6-dehydratase | D5071_16380 | Not Available | Positive | 3623357 - 3624424 | 39840.9 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | D5071_16385 | Not Available | Positive | 3624462 - 3625193 | 26987.2 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | D5071_16390 | Not Available | Positive | 3625198 - 3626328 | 42070.5 |
| lipid iii flippase wzxe | D5071_16395 | Not Available | Positive | 3626330 - 3627580 | 45166.6 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | D5071_16400 | Not Available | Positive | 3627577 - 3628662 | 41195.8 |
| o-antigen assembly polymerase | D5071_16405 | Not Available | Positive | 3628659 - 3630047 | 52736.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
