Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | D5071_01070 | Not Available | Negative | 216206 - 216637 | 15770.3 |
| murein hydrolase activator envc | D5071_01075 | Not Available | Positive | 216883 - 218184 | 48303.4 |
| divergent polysaccharide deacetylase family protein | D5071_01080 | Not Available | Positive | 218187 - 219134 | 34965.6 |
| l-threonine 3-dehydrogenase | D5071_01085 | Not Available | Negative | 219185 - 220216 | 37616.6 |
| glycine c-acetyltransferase | D5071_01090 | Not Available | Negative | 220227 - 221423 | 43409.2 |
| adp-glyceromanno-heptose 6-epimerase | D5071_01095 | Not Available | Positive | 221666 - 222598 | 34812.6 |
| adp-heptose--lps heptosyltransferase rfaf | D5071_01100 | Not Available | Positive | 222622 - 223671 | 38625.8 |
| lipopolysaccharide heptosyltransferase rfac | D5071_01105 | Not Available | Positive | 223668 - 224639 | 36659.3 |
| hypothetical protein | D5071_01110 | Not Available | Negative | 224632 - 224901 | 10293.7 |
| o-antigen ligase domain-containing protein | D5071_01115 | Not Available | Positive | 224909 - 226192 | 47402.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
