Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate/aspartate:proton symporter gltp | D5071_16210 | Not Available | Negative | 3580865 - 3582181 | 47298.3 |
| hth-type transcriptional regulator cbl | D5071_16215 | Not Available | Negative | 3582677 - 3583630 | 35775.9 |
| Trna-trp | Not Available | Not Available | Positive | 3584041 - 3584116 | Not Available |
| abc transporter substrate-binding protein | D5071_16225 | Not Available | Positive | 3584556 - 3585512 | 34091.1 |
| sugar abc transporter atp-binding protein | D5071_16230 | Not Available | Positive | 3585703 - 3587223 | 55456.4 |
| abc transporter permease | D5071_16235 | Not Available | Positive | 3587210 - 3588220 | 34964.6 |
| sugar abc transporter permease yjff | D5071_16240 | Not Available | Positive | 3588220 - 3589182 | 34309.2 |
| hth-type transcriptional regulator hdfr | D5071_16245 | Not Available | Negative | 3589204 - 3590031 | 31386.8 |
| duf413 domain-containing protein | D5071_16250 | Not Available | Positive | 3590152 - 3590490 | 13236.4 |
| atp-dependent protease | D5071_16255 | Not Available | Negative | 3590548 - 3592074 | 55515.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
