Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D5071_16055 | Not Available | Positive | 3538350 - 3539627 | 46101.6 |
| tonb-dependent siderophore receptor | D5071_16060 | Not Available | Positive | 3539835 - 3541844 | 72990.1 |
| cdp-diacylglycerol diphosphatase | D5071_16065 | Not Available | Positive | 3542077 - 3542832 | 28065.5 |
| lysr family transcriptional regulator | D5071_16070 | Not Available | Positive | 3542960 - 3543916 | 35954.5 |
| alkanesulfonate-binding protein | D5071_16075 | Not Available | Negative | 3543929 - 3545065 | 40936.9 |
| abc transporter permease | D5071_16080 | Not Available | Positive | 3545304 - 3546893 | 57608.5 |
| abc transporter atp-binding protein | D5071_16085 | Not Available | Positive | 3546890 - 3547696 | 29639.0 |
| thioredoxin | D5071_16090 | Not Available | Positive | 3547713 - 3549506 | 67315.2 |
| hypothetical protein | D5071_16095 | Not Available | Positive | 3549902 - 3550255 | 13013.9 |
| abc transporter atp-binding protein | D5071_16100 | Not Available | Positive | 3550515 - 3551288 | 27017.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
