Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | D5071_15950 | Not Available | Negative | 3515893 - 3516348 | 17100.8 |
| mfs transporter | D5071_15955 | Not Available | Positive | 3516415 - 3517671 | 43034.1 |
| transcriptional regulator | D5071_15960 | Not Available | Negative | 3517686 - 3518036 | 12947.6 |
| threonine/serine dehydratase | D5071_15965 | Not Available | Positive | 3518089 - 3519093 | 35315.6 |
| helix-turn-helix domain-containing protein | D5071_15970 | Not Available | Negative | 3519131 - 3519433 | 11108.6 |
| transcriptional regulator | D5071_15980 | Not Available | Negative | 3520016 - 3520456 | 16985.2 |
| nad(p)-dependent oxidoreductase | D5071_15985 | Not Available | Positive | 3520559 - 3521170 | 21663.6 |
| glutathione-dependent disulfide-bond oxidoreductase | D5071_15990 | Not Available | Positive | 3521335 - 3522174 | 30974.7 |
| bcr/cfla family efflux mfs transporter | D5071_15995 | Not Available | Negative | 3522234 - 3523478 | 43896.7 |
| tetr/acrr family transcriptional regulator | D5071_16000 | Not Available | Positive | 3523572 - 3524858 | 47566.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
