Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathionylspermidine synthase family protein | D5071_15850 | Not Available | Positive | 3493974 - 3495134 | 44806.8 |
| hypothetical protein | D5071_15855 | Not Available | Negative | 3495131 - 3495316 | 6702.49 |
| 4,5-dopa dioxygenase extradiol | D5071_15860 | Not Available | Negative | 3495394 - 3496179 | 28752.1 |
| type ii toxin-antitoxin system rele/pare family toxin | D5071_15865 | Not Available | Negative | 3496356 - 3496643 | 10984.6 |
| plasmid stabilization protein | D5071_15870 | Not Available | Negative | 3496633 - 3496887 | 9208.88 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | D5071_15875 | Not Available | Negative | 3497272 - 3497820 | 20782.0 |
| excinuclease abc subunit uvrc | D5071_15880 | Not Available | Negative | 3497879 - 3499711 | 68015.9 |
| two-component system response regulator uvry | D5071_15885 | Not Available | Negative | 3499704 - 3500360 | 23991.4 |
| duf2594 family protein | D5071_15890 | Not Available | Positive | 3501003 - 3501227 | 8006.7 |
| hypothetical protein | D5071_15895 | Not Available | Negative | 3501321 - 3501608 | 10933.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
