Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_01020 | Not Available | Negative | 202896 - 203195 | 10581.1 |
| hamp domain-containing protein | D5071_01025 | Not Available | Negative | 203584 - 205245 | 59518.4 |
| hamp domain-containing protein | D5071_01030 | Not Available | Negative | 205930 - 207552 | 57935.6 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | D5071_01035 | Not Available | Negative | 208090 - 210354 | 84612.7 |
| hth-type transcriptional regulator metr | D5071_01040 | Not Available | Positive | 210459 - 211394 | 35150.4 |
| dmt family transporter | D5071_01045 | Not Available | Negative | 211300 - 212199 | 33869.0 |
| phospholipid:lipid a palmitoyltransferase | D5071_01050 | Not Available | Negative | 212448 - 213101 | 24961.1 |
| serine o-acetyltransferase | D5071_01055 | Not Available | Negative | 213408 - 214229 | 29320.4 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | D5071_01060 | Not Available | Negative | 214497 - 215516 | 36055.6 |
| protein-export chaperone secb | D5071_01065 | Not Available | Negative | 215516 - 215986 | 17247.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
