Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acylglycerol-3-phosphate o-acyltransferase | D5071_15700 | Not Available | Negative | 3463013 - 3463750 | 27521.8 |
| dna topoisomerase iv subunit a | D5071_15705 | Not Available | Negative | 3463901 - 3466171 | 84028.4 |
| hypothetical protein | D5071_15710 | Not Available | Negative | 3466384 - 3466887 | 18067.4 |
| hypothetical protein | D5071_15715 | Not Available | Negative | 3466923 - 3467573 | 23847.8 |
| duf2314 domain-containing protein | D5071_15720 | Not Available | Negative | 3467636 - 3467971 | 12836.1 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | D5071_15725 | Not Available | Positive | 3468222 - 3470624 | 88002.0 |
| transcription antiterminator | D5071_15730 | Not Available | Positive | 3471057 - 3472607 | 59356.5 |
| pts sugar transporter subunit iia | D5071_15735 | Not Available | Positive | 3472656 - 3473135 | 17707.9 |
| pts fructose transporter subunit iib | D5071_15740 | Not Available | Positive | 3473149 - 3473463 | 11051.6 |
| pts fructose transporter subunit iic | D5071_15745 | Not Available | Positive | 3473490 - 3474581 | 38707.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
