Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_15600 | Not Available | Negative | 3440062 - 3440520 | 16118.7 |
| polymer-forming cytoskeletal protein | D5071_15605 | Not Available | Negative | 3440702 - 3441253 | 19664.1 |
| aminoimidazole riboside kinase | D5071_15610 | Not Available | Positive | 3441727 - 3442650 | 33873.4 |
| carbohydrate porin | D5071_15615 | Not Available | Positive | 3442848 - 3444383 | 56478.3 |
| pts sucrose transporter subunit iibc | D5071_15620 | Not Available | Positive | 3444464 - 3445834 | 47757.6 |
| sucrose-6-phosphate hydrolase | D5071_15625 | Not Available | Positive | 3445834 - 3447243 | 53538.9 |
| laci family dna-binding transcriptional regulator | D5071_15630 | Not Available | Positive | 3447274 - 3448293 | 38186.1 |
| tonb system transport protein exbd | D5071_15635 | Not Available | Negative | 3448404 - 3448829 | 15359.7 |
| biopolymer transporter exbb | D5071_15640 | Not Available | Negative | 3448833 - 3449843 | 34945.0 |
| trap transporter substrate-binding protein | D5071_15645 | Not Available | Positive | 3450516 - 3451493 | 36205.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
