Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | D5071_15550 | Not Available | Positive | 3430493 - 3431428 | 34626.7 |
| aspartate carbamoyltransferase regulatory subunit | D5071_15555 | Not Available | Positive | 3431444 - 3431908 | 17368.9 |
| 2-iminobutanoate/2-iminopropanoate deaminase | D5071_15560 | Not Available | Positive | 3432007 - 3432393 | 13903.8 |
| anaerobic ribonucleoside-triphosphate reductase | D5071_15565 | Not Available | Positive | 3432793 - 3434931 | 79902.0 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | D5071_15570 | Not Available | Positive | 3435013 - 3435477 | 17469.0 |
| hypothetical protein | D5071_15575 | Not Available | Negative | 3435489 - 3436142 | 23516.5 |
| hypothetical protein | D5071_15580 | Not Available | Negative | 3436248 - 3436694 | 16995.5 |
| transcriptional regulator | D5071_15585 | Not Available | Negative | 3436704 - 3437150 | 16564.0 |
| mfs transporter | D5071_15590 | Not Available | Positive | 3437304 - 3438560 | 43879.1 |
| aspartate aminotransferase family protein | D5071_15595 | Not Available | Positive | 3438615 - 3439967 | 48713.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
