Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | D5071_15440 | Not Available | Positive | 3405078 - 3407027 | 70435.5 |
| carbonic anhydrase | D5071_15445 | Not Available | Positive | 3407608 - 3408276 | 24946.8 |
| sulp family inorganic anion transporter | D5071_15450 | Not Available | Positive | 3408273 - 3409742 | 52370.1 |
| type ii toxin-antitoxin system hipa family toxin | D5071_15455 | Not Available | Negative | 3409879 - 3411186 | 48664.5 |
| helix-turn-helix domain-containing protein | D5071_15460 | Not Available | Negative | 3411190 - 3411438 | 9316.05 |
| duf1615 domain-containing protein | D5071_15465 | Not Available | Negative | 3411553 - 3412650 | 40454.5 |
| hnh endonuclease | D5071_15470 | Not Available | Positive | 3412804 - 3413595 | 29494.2 |
| hypothetical protein | D5071_15475 | Not Available | Negative | 3413606 - 3415207 | 60055.4 |
| rtcb family protein | D5071_15485 | Not Available | Negative | 3416049 - 3417275 | 45157.3 |
| aaa family atpase | D5071_15490 | Not Available | Positive | 3417475 - 3419076 | 60640.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
