Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nicotinamidase/pyrazinamidase | D5071_15390 | Not Available | Negative | 3390260 - 3390907 | 23365.7 |
| l-asparaginase 1 | D5071_15395 | Not Available | Negative | 3390926 - 3391945 | 37017.2 |
| signal peptide peptidase sppa | D5071_15400 | Not Available | Negative | 3392179 - 3394029 | 67435.5 |
| nad(p)h nitroreductase | D5071_15405 | Not Available | Positive | 3394298 - 3394849 | 20122.0 |
| dna topoisomerase iii | D5071_15410 | Not Available | Positive | 3394946 - 3396871 | 72379.9 |
| duf1496 domain-containing protein | D5071_15415 | Not Available | Positive | 3396868 - 3397155 | 10426.8 |
| exodeoxyribonuclease iii | D5071_15420 | Not Available | Negative | 3397278 - 3398084 | 30694.3 |
| trimeric intracellular cation channel family protein | D5071_15425 | Not Available | Positive | 3398683 - 3399309 | 22666.6 |
| methyl-accepting chemotaxis protein | D5071_15430 | Not Available | Positive | 3399864 - 3401441 | 56793.8 |
| magnesium-translocating p-type atpase | D5071_15435 | Not Available | Positive | 3401927 - 3404638 | 99460.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
