Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family efflux mfs transporter | D5071_15340 | Not Available | Negative | 3379581 - 3380780 | 42257.5 |
| hemerythrin domain-containing protein | D5071_15345 | Not Available | Negative | 3380970 - 3381380 | 15972.7 |
| yeah/yhbh family protein | D5071_15350 | Not Available | Negative | 3381520 - 3382794 | 49453.2 |
| prka family serine protein kinase | D5071_15355 | Not Available | Negative | 3382831 - 3384765 | 74222.0 |
| mipa/ompv family protein | D5071_15360 | Not Available | Positive | 3385221 - 3385970 | 27514.2 |
| aldo/keto reductase | D5071_15365 | Not Available | Positive | 3386129 - 3386980 | 31554.1 |
| d-hexose-6-phosphate mutarotase | D5071_15370 | Not Available | Negative | 3387057 - 3387926 | 32364.3 |
| glyceraldehyde-3-phosphate dehydrogenase | D5071_15375 | Not Available | Negative | 3388034 - 3389038 | 35913.9 |
| peptide-methionine (r)-s-oxide reductase | D5071_15380 | Not Available | Positive | 3389374 - 3389793 | 15550.8 |
| duf1315 family protein | D5071_15385 | Not Available | Positive | 3389930 - 3390208 | 10477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
