Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmc family peroxiredoxin | D5071_15290 | Not Available | Positive | 3370296 - 3370724 | 15097.0 |
| cytochrome b562 | D5071_15295 | Not Available | Positive | 3371032 - 3371427 | 14063.9 |
| tetr family transcriptional regulator | D5071_15300 | Not Available | Positive | 3371533 - 3372087 | 20815.9 |
| mfs transporter | D5071_15305 | Not Available | Positive | 3372186 - 3373421 | 43276.0 |
| gnat family n-acetyltransferase | D5071_15310 | Not Available | Positive | 3373558 - 3374058 | 18273.8 |
| methyl-accepting chemotaxis protein | D5071_15315 | Not Available | Positive | 3374215 - 3376188 | 70923.4 |
| argp/lysg family dna-binding transcriptional regulator | D5071_15320 | Not Available | Positive | 3376379 - 3377260 | 32534.1 |
| duf3811 domain-containing protein | D5071_15325 | Not Available | Negative | 3377302 - 3377568 | 10402.3 |
| steroid delta-isomerase | D5071_15330 | Not Available | Positive | 3377724 - 3378059 | 12505.8 |
| d-amino acid dehydrogenase | D5071_15335 | Not Available | Positive | 3378290 - 3379543 | 46055.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
