Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_00965 | Not Available | Negative | 187106 - 187300 | 6960.91 |
| hypothetical protein | D5071_00970 | Not Available | Positive | 187632 - 189929 | 90299.9 |
| hypothetical protein | D5071_00975 | Not Available | Positive | 189932 - 192499 | 99874.8 |
| starvation-sensing protein rspa | D5071_00980 | Not Available | Negative | 192577 - 193776 | 45134.0 |
| pts sugar transporter | D5071_00985 | Not Available | Positive | 194224 - 195597 | 49121.1 |
| phosphoenolpyruvate carboxylase | D5071_00990 | Not Available | Positive | 195840 - 198479 | 98639.6 |
| tyrosine-protein phosphatase | D5071_00995 | Not Available | Negative | 198564 - 199346 | 28922.3 |
| uridine phosphorylase | D5071_01000 | Not Available | Negative | 199495 - 200265 | 27241.8 |
| yafy family transcriptional regulator | D5071_01010 | Not Available | Positive | 201213 - 201890 | 25501.1 |
| dienelactone hydrolase family protein | D5071_01015 | Not Available | Positive | 201937 - 202764 | 30739.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
