Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D5071_15135 | Not Available | Negative | 3331412 - 3332743 | 48423.1 |
| lysr family transcriptional regulator | D5071_15140 | Not Available | Positive | 3333031 - 3333951 | 34851.9 |
| lysr family transcriptional regulator | D5071_15145 | Not Available | Negative | 3333967 - 3334854 | 32973.7 |
| mfs transporter | D5071_15150 | Not Available | Positive | 3335000 - 3336520 | 53167.7 |
| anion transporter | D5071_15155 | Not Available | Negative | 3336581 - 3337681 | 40606.5 |
| redox-regulated atpase ychf | D5071_15165 | Not Available | Negative | 3338464 - 3339555 | 39678.4 |
| aminoacyl-trna hydrolase | D5071_15170 | Not Available | Negative | 3339685 - 3340272 | 21250.8 |
| duf2583 domain-containing protein | D5071_15175 | Not Available | Positive | 3340587 - 3340856 | 10295.8 |
| ribose-phosphate pyrophosphokinase | D5071_15180 | Not Available | Negative | 3341052 - 3341999 | 34365.5 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | D5071_15185 | Not Available | Negative | 3342137 - 3343009 | 32105.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
