Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded-dna-specific exonuclease recj | D5071_15030 | Not Available | Positive | 3309964 - 3311727 | 64609.1 |
| peptide chain release factor 2 | D5071_15035 | Not Available | Positive | 3311834 - 3312932 | 41202.0 |
| lysine--trna ligase | D5071_15040 | Not Available | Positive | 3312941 - 3314458 | 57597.5 |
| arac family transcriptional regulator | D5071_15045 | Not Available | Positive | 3314736 - 3315491 | 28730.0 |
| lyse family translocator | D5071_15050 | Not Available | Positive | 3315554 - 3316237 | 24799.8 |
| Trna-gly | Not Available | Not Available | Positive | 3316319 - 3316392 | Not Available |
| hypothetical protein | D5071_15065 | Not Available | Positive | 3317029 - 3318735 | 64216.7 |
| d-2-hydroxyacid dehydrogenase | D5071_15070 | Not Available | Positive | 3318805 - 3319731 | 33789.6 |
| hypothetical protein | D5071_15075 | Not Available | Positive | 3319955 - 3321430 | 52652.3 |
| cell division topological specificity factor | D5071_15080 | Not Available | Negative | 3321840 - 3322109 | 10307.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
