Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsh protease activity modulator hflk | D5071_14925 | Not Available | Negative | 3286445 - 3287704 | 45769.5 |
| gtpase hflx | D5071_14930 | Not Available | Negative | 3287801 - 3289081 | 48311.0 |
| rna-binding protein hfq | D5071_14935 | Not Available | Negative | 3289176 - 3289475 | 10935.8 |
| 5-dehydro-2-deoxygluconokinase | D5071_14940 | Not Available | Negative | 3289739 - 3291643 | 70278.5 |
| hypothetical protein | D5071_14945 | Not Available | Positive | 3292245 - 3292874 | 22673.4 |
| hypothetical protein | D5071_14950 | Not Available | Positive | 3293648 - 3294277 | 22555.3 |
| hypothetical protein | D5071_14960 | Not Available | Positive | 3295623 - 3296252 | 22786.4 |
| hypothetical protein | D5071_14965 | Not Available | Negative | 3296386 - 3296829 | 17359.9 |
| alpha-galactosidase | D5071_14970 | Not Available | Negative | 3297616 - 3299772 | 81476.8 |
| laci family dna-binding transcriptional regulator | D5071_14975 | Not Available | Negative | 3299982 - 3300986 | 36873.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
