Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease i | D5071_14875 | Not Available | Positive | 3277370 - 3278068 | 26363.9 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | D5071_14880 | Not Available | Positive | 3278186 - 3278920 | 26752.6 |
| glutathione synthase | D5071_14885 | Not Available | Positive | 3278932 - 3279891 | 36039.5 |
| yqge/algh family protein | D5071_14890 | Not Available | Positive | 3279975 - 3280538 | 20671.7 |
| holliday junction resolvase ruvx | D5071_14895 | Not Available | Positive | 3280538 - 3280957 | 15271.3 |
| class 1 fructose-bisphosphatase | D5071_14900 | Not Available | Negative | 3281054 - 3282058 | 36852.0 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | D5071_14905 | Not Available | Positive | 3282228 - 3283613 | 50415.7 |
| adenylosuccinate synthase | D5071_14910 | Not Available | Negative | 3283723 - 3285021 | 47063.6 |
| duf2065 domain-containing protein | D5071_14915 | Not Available | Negative | 3285121 - 3285321 | 7316.5 |
| protease modulator hflc | D5071_14920 | Not Available | Negative | 3285446 - 3286441 | 37484.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
