Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | D5071_14775 | Not Available | Negative | 3255655 - 3256392 | 27317.9 |
| gtpase era | D5071_14780 | Not Available | Negative | 3256404 - 3257309 | 34203.3 |
| ribonuclease iii | D5071_14785 | Not Available | Negative | 3257306 - 3257986 | 25654.8 |
| signal peptidase i | D5071_14790 | Not Available | Negative | 3258293 - 3259258 | 35589.9 |
| elongation factor 4 | D5071_14795 | Not Available | Negative | 3259275 - 3261074 | 66693.5 |
| soxr-reducing system protein rsec | D5071_14800 | Not Available | Negative | 3261371 - 3261823 | 15881.6 |
| sigma-e factor regulatory protein rseb | D5071_14805 | Not Available | Negative | 3261820 - 3262782 | 35695.7 |
| anti-sigma-e factor rsea | D5071_14810 | Not Available | Negative | 3262782 - 3263429 | 23549.8 |
| rna polymerase sigma factor rpoe | D5071_14815 | Not Available | Negative | 3263489 - 3264064 | 21752.9 |
| l-aspartate oxidase | D5071_14820 | Not Available | Positive | 3264441 - 3266042 | 59710.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
