Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_14665 | Not Available | Positive | 3232491 - 3232946 | 15855.9 |
| pilus assembly protein | D5071_14670 | Not Available | Positive | 3232949 - 3233467 | 19251.4 |
| potassium transporter trkg | D5071_14675 | Not Available | Positive | 3233464 - 3234123 | 24095.6 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | D5071_14680 | Not Available | Positive | 3234137 - 3235274 | 40513.0 |
| hypothetical protein | D5071_14685 | Not Available | Positive | 3235415 - 3236386 | 32437.7 |
| hth-type transcriptional regulator cysb | D5071_14700 | Not Available | Negative | 3236744 - 3237718 | 35942.2 |
| type i dna topoisomerase | D5071_14705 | Not Available | Negative | 3238099 - 3240699 | 97517.3 |
| duf2498 family protein | D5071_14710 | Not Available | Positive | 3241069 - 3241338 | 10276.2 |
| protease sohb | D5071_14715 | Not Available | Negative | 3241397 - 3242443 | 38757.1 |
| ycik family oxidoreductase | D5071_14720 | Not Available | Positive | 3242800 - 3243561 | 27551.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
