Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_14615 | Not Available | Negative | 3224323 - 3225204 | 32594.6 |
| duf2786 domain-containing protein | D5071_14620 | Not Available | Negative | 3225324 - 3226022 | 26416.1 |
| hypothetical protein | D5071_14625 | Not Available | Negative | 3226077 - 3226373 | 11217.3 |
| hypothetical protein | D5071_14630 | Not Available | Negative | 3226510 - 3226974 | 17773.6 |
| hypothetical protein | D5071_14635 | Not Available | Negative | 3226971 - 3227195 | 8141.83 |
| conjugal transfer protein traf | D5071_14640 | Not Available | Negative | 3227296 - 3228495 | 42082.7 |
| hypothetical protein | D5071_14645 | Not Available | Positive | 3229099 - 3229149 | 1646.96 |
| site-specific integrase | D5071_14650 | Not Available | Negative | 3230152 - 3231041 | 32973.9 |
| pilus assembly protein | D5071_14655 | Not Available | Positive | 3231042 - 3231834 | 28574.4 |
| pilus assembly protein pilx | D5071_14660 | Not Available | Positive | 3231889 - 3232488 | 20994.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
