Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abi family protein | D5071_14515 | Not Available | Positive | 3207847 - 3208806 | 37641.3 |
| acetyltransferase | D5071_14520 | Not Available | Negative | 3208987 - 3209406 | 15505.6 |
| conjugative transfer atpase | D5071_14525 | Not Available | Negative | 3209403 - 3212258 | 107526.0 |
| tigr03751 family conjugal transfer lipoprotein | D5071_14530 | Not Available | Negative | 3212258 - 3212668 | 15184.1 |
| hypothetical protein | D5071_14535 | Not Available | Negative | 3212661 - 3213104 | 16878.1 |
| tigr03752 family integrating conjugative element protein | D5071_14540 | Not Available | Negative | 3213114 - 3214652 | 53968.9 |
| tigr03749 family integrating conjugative element protein | D5071_14545 | Not Available | Negative | 3214642 - 3215568 | 33453.1 |
| tigr03746 family integrating conjugative element protein | D5071_14550 | Not Available | Negative | 3215565 - 3216221 | 24987.2 |
| tigr03750 family conjugal transfer protein | D5071_14555 | Not Available | Negative | 3216218 - 3216580 | 13450.8 |
| tigr03745 family integrating conjugative element membrane protein | D5071_14560 | Not Available | Negative | 3216590 - 3216931 | 12054.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
