Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_14465 | Not Available | Negative | 3197556 - 3197951 | 15131.0 |
| dna-binding protein | D5071_14470 | Not Available | Negative | 3198001 - 3198918 | 34476.1 |
| duf2726 domain-containing protein | D5071_14475 | Not Available | Negative | 3200051 - 3200656 | 23535.6 |
| abi family protein | D5071_14480 | Not Available | Negative | 3200772 - 3201821 | 39854.2 |
| hypothetical protein | D5071_14485 | Not Available | Positive | 3202310 - 3202729 | 15036.8 |
| conjugal transfer protein trag | D5071_14490 | Not Available | Negative | 3202785 - 3204320 | 56109.2 |
| hypothetical protein | D5071_14495 | Not Available | Negative | 3204317 - 3204688 | 14077.5 |
| integrating conjugative element protein | D5071_14500 | Not Available | Negative | 3204691 - 3206115 | 50575.1 |
| tigr03756 family integrating conjugative element protein | D5071_14505 | Not Available | Negative | 3206125 - 3207099 | 34885.5 |
| tigr03757 family integrating conjugative element protein | D5071_14510 | Not Available | Negative | 3207096 - 3207503 | 15194.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
