Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_14365 | Not Available | Positive | 3183076 - 3183471 | 14400.3 |
| hypothetical protein | D5071_14370 | Not Available | Negative | 3183506 - 3184162 | 25418.7 |
| hypothetical protein | D5071_14375 | Not Available | Positive | 3184549 - 3185544 | 36790.6 |
| hypothetical protein | D5071_14380 | Not Available | Positive | 3185660 - 3186535 | 32383.3 |
| hypothetical protein | D5071_14385 | Not Available | Negative | 3186712 - 3187632 | 35561.7 |
| hypothetical protein | D5071_14390 | Not Available | Negative | 3187710 - 3188603 | 34090.6 |
| duf1738 domain-containing protein | D5071_14395 | Not Available | Negative | 3188678 - 3190633 | 72674.8 |
| hypothetical protein | D5071_14400 | Not Available | Negative | 3190698 - 3191183 | 18858.4 |
| hypothetical protein | D5071_14405 | Not Available | Negative | 3191256 - 3191528 | 10201.9 |
| hypothetical protein | D5071_14410 | Not Available | Negative | 3191525 - 3191968 | 17000.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
