Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | D5071_14315 | Not Available | Positive | 3173445 - 3174320 | 30324.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D5071_14320 | Not Available | Positive | 3174449 - 3175672 | 46519.2 |
| sdr family oxidoreductase | D5071_14325 | Not Available | Negative | 3176098 - 3176871 | 27137.0 |
| dsba family oxidoreductase | D5071_14330 | Not Available | Negative | 3176935 - 3177636 | 25489.1 |
| alkene reductase | D5071_14335 | Not Available | Negative | 3177704 - 3178810 | 40655.1 |
| thioredoxin | D5071_14340 | Not Available | Positive | 3179037 - 3179366 | 12307.8 |
| carboxymuconolactone decarboxylase family protein | D5071_14345 | Not Available | Negative | 3179395 - 3179733 | 11606.0 |
| tetr/acrr family transcriptional regulator | D5071_14350 | Not Available | Negative | 3179738 - 3180319 | 21459.8 |
| osmc family peroxiredoxin | D5071_14355 | Not Available | Negative | 3180546 - 3181103 | 19612.3 |
| atp-dependent helicase | D5071_14360 | Not Available | Negative | 3181440 - 3182897 | 55230.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
