Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate hydrolase family protein | D5071_14265 | Not Available | Negative | 3160752 - 3161585 | 29698.9 |
| upf0261 family protein | D5071_14270 | Not Available | Negative | 3161599 - 3162822 | 43411.9 |
| tetr/acrr family transcriptional regulator | D5071_14275 | Not Available | Positive | 3163111 - 3163740 | 23537.2 |
| sdr family nad(p)-dependent oxidoreductase | D5071_14280 | Not Available | Positive | 3163820 - 3164560 | 26474.4 |
| l-asparagine permease | D5071_14285 | Not Available | Positive | 3164870 - 3166321 | 52167.8 |
| ornithine decarboxylase | D5071_14290 | Not Available | Negative | 3166389 - 3168542 | 80304.8 |
| Trna-phe | Not Available | Not Available | Positive | 3169218 - 3169293 | Not Available |
| site-specific integrase | D5071_14300 | Not Available | Negative | 3169483 - 3170505 | 40457.8 |
| hypothetical protein | D5071_14305 | Not Available | Negative | 3170592 - 3172184 | 56995.9 |
| alpha/beta hydrolase | D5071_14310 | Not Available | Negative | 3172448 - 3173200 | 27403.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
