Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2509 family protein | D5071_14150 | Not Available | Negative | 3142165 - 3142581 | 15221.3 |
| prepilin peptidase-dependent protein | D5071_14155 | Not Available | Negative | 3142617 - 3143243 | 23457.4 |
| prepilin peptidase-dependent protein | D5071_14160 | Not Available | Negative | 3143237 - 3143740 | 18737.9 |
| hypothetical protein | D5071_14170 | Not Available | Positive | 3144541 - 3144777 | 8714.37 |
| thymidylate synthase | D5071_14175 | Not Available | Negative | 3144822 - 3145616 | 30345.2 |
| prolipoprotein diacylglyceryl transferase | D5071_14180 | Not Available | Negative | 3145653 - 3146519 | 32584.5 |
| phosphoenolpyruvate-protein phosphotransferase ptsp | D5071_14185 | Not Available | Negative | 3146905 - 3149151 | 83475.2 |
| rna pyrophosphohydrolase | D5071_14190 | Not Available | Negative | 3149164 - 3149697 | 20967.4 |
| dna mismatch repair endonuclease muth | D5071_14200 | Not Available | Positive | 3150393 - 3151088 | 25732.1 |
| terc family protein | D5071_14205 | Not Available | Positive | 3151367 - 3152083 | 26481.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
