Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | D5071_14100 | Not Available | Positive | 3123873 - 3124721 | 32111.8 |
| Trna-tyr | Not Available | Not Available | Positive | 3124877 - 3124961 | Not Available |
| n-acetylmuramoyl-l-alanine amidase | D5071_14110 | Not Available | Negative | 3125182 - 3126426 | 46083.3 |
| amino-acid n-acetyltransferase | D5071_14115 | Not Available | Positive | 3126808 - 3128133 | 48994.0 |
| hypothetical protein | D5071_14120 | Not Available | Negative | 3128308 - 3129357 | 39522.7 |
| exodeoxyribonuclease v subunit alpha | D5071_14125 | Not Available | Negative | 3129730 - 3131595 | 67754.6 |
| exodeoxyribonuclease v subunit beta | D5071_14130 | Not Available | Negative | 3131592 - 3135173 | 135158.0 |
| pitrilysin | D5071_14135 | Not Available | Negative | 3135170 - 3138106 | 109866.0 |
| exodeoxyribonuclease v subunit gamma | D5071_14140 | Not Available | Negative | 3138203 - 3141601 | 130032.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D5071_14145 | Not Available | Negative | 3141783 - 3142181 | 15131.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
