Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | D5071_14000 | Not Available | Negative | 3098151 - 3099263 | 41391.0 |
| abc transporter permease | D5071_14005 | Not Available | Negative | 3099305 - 3099964 | 23618.7 |
| methionine abc transporter atp-binding protein | D5071_14010 | Not Available | Negative | 3099957 - 3100979 | 37094.6 |
| phosphatase pap2 family protein | D5071_14015 | Not Available | Positive | 3101539 - 3102828 | 47298.4 |
| hamp domain-containing protein | D5071_14020 | Not Available | Positive | 3103270 - 3104796 | 54751.6 |
| cardiolipin synthase | D5071_14025 | Not Available | Positive | 3105069 - 3106529 | 55219.8 |
| duf440 family protein | D5071_14030 | Not Available | Positive | 3106585 - 3106908 | 12369.3 |
| abc transporter atp-binding protein | D5071_14035 | Not Available | Negative | 3106980 - 3108014 | 38323.7 |
| abc transporter atp-binding protein | D5071_14040 | Not Available | Negative | 3108011 - 3109006 | 36616.9 |
| oligopeptide abc transporter permease oppc | D5071_14045 | Not Available | Negative | 3109018 - 3109926 | 33209.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
