Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein operon transcriptional activator | D5071_13745 | Not Available | Positive | 3031525 - 3032514 | 37035.8 |
| 1,3-beta-glucanase | D5071_13750 | Not Available | Negative | 3032586 - 3034115 | 55367.1 |
| res domain-containing protein | D5071_13755 | Not Available | Negative | 3034484 - 3034972 | 18255.0 |
| duf2384 domain-containing protein | D5071_13760 | Not Available | Negative | 3034969 - 3035409 | 16164.5 |
| peptide abc transporter substrate-binding protein sapa | D5071_13765 | Not Available | Positive | 3035581 - 3037269 | 63561.4 |
| peptide abc transporter permease sapb | D5071_13770 | Not Available | Positive | 3037266 - 3038231 | 35396.4 |
| peptide abc transporter permease sapc | D5071_13775 | Not Available | Positive | 3038218 - 3039108 | 32198.8 |
| peptide abc transporter atp-binding protein sapd | D5071_13780 | Not Available | Positive | 3039125 - 3040117 | 37356.2 |
| peptide abc transporter atp-binding protein sapf | D5071_13785 | Not Available | Positive | 3040117 - 3040932 | 30517.1 |
| enoyl-acp reductase fabi | D5071_13790 | Not Available | Positive | 3041126 - 3041914 | 27828.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
