Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycjx family protein | D5071_13690 | Not Available | Negative | 3016320 - 3017717 | 52797.6 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | D5071_13695 | Not Available | Positive | 3018012 - 3019754 | 65415.0 |
| toxin-activating lysine-acyltransferase | D5071_13700 | Not Available | Positive | 3019766 - 3020281 | 19638.6 |
| hypothetical protein | D5071_13710 | Not Available | Positive | 3027686 - 3027943 | 9651.2 |
| hypothetical protein | D5071_13715 | Not Available | Positive | 3028003 - 3028488 | 18387.7 |
| hypothetical protein | D5071_13720 | Not Available | Positive | 3028724 - 3029173 | 16818.1 |
| hypothetical protein | D5071_13725 | Not Available | Positive | 3029380 - 3029871 | 18734.0 |
| envelope stress response membrane protein pspc | D5071_13730 | Not Available | Negative | 3029964 - 3030329 | 13805.9 |
| envelope stress response membrane protein pspb | D5071_13735 | Not Available | Negative | 3030329 - 3030553 | 8870.8 |
| phage shock protein pspa | D5071_13740 | Not Available | Negative | 3030634 - 3031299 | 25101.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
