Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_13640 | Not Available | Positive | 3004157 - 3004939 | 29606.3 |
| hypothetical protein | D5071_13645 | Not Available | Positive | 3004966 - 3007080 | 77770.0 |
| transcriptional regulator tyrr | D5071_13650 | Not Available | Negative | 3007130 - 3008698 | 58557.7 |
| m20/m25/m40 family metallo-hydrolase | D5071_13655 | Not Available | Negative | 3008835 - 3010379 | 55301.1 |
| laci family transcriptional regulator | D5071_13660 | Not Available | Negative | 3010752 - 3011756 | 36948.4 |
| pts lactose/cellobiose transporter subunit iia | D5071_13665 | Not Available | Negative | 3011829 - 3012134 | 11263.8 |
| pts sugar transporter subunit iic | D5071_13670 | Not Available | Negative | 3012167 - 3013462 | 47066.1 |
| pts sugar transporter subunit iib | D5071_13675 | Not Available | Negative | 3013483 - 3013788 | 11307.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | D5071_13680 | Not Available | Negative | 3013812 - 3014972 | 43467.0 |
| tigr01620 family protein | D5071_13685 | Not Available | Negative | 3015280 - 3016323 | 38609.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
