Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | D5071_13535 | Not Available | Positive | 2981782 - 2982648 | 32370.0 |
| carboxy terminal-processing peptidase | D5071_13540 | Not Available | Negative | 2982760 - 2984775 | 75197.8 |
| rna chaperone proq | D5071_13545 | Not Available | Negative | 2984795 - 2985553 | 27890.9 |
| gaf domain-containing protein | D5071_13550 | Not Available | Negative | 2985638 - 2986144 | 18355.9 |
| paraquat-inducible protein a | D5071_13555 | Not Available | Positive | 2986452 - 2987732 | 47738.0 |
| pqib family protein | D5071_13560 | Not Available | Positive | 2987735 - 2990377 | 96036.7 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | D5071_13565 | Not Available | Positive | 2990503 - 2991957 | 53977.3 |
| duf1482 family protein | D5071_13570 | Not Available | Positive | 2992083 - 2992274 | 7214.59 |
| extensin | D5071_13575 | Not Available | Negative | 2992294 - 2992989 | 25181.1 |
| hypothetical protein | D5071_13585 | Not Available | Positive | 2993577 - 2994059 | 17543.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
