Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | D5071_13485 | Not Available | Positive | 2971288 - 2972409 | 42356.7 |
| peptidase t | D5071_13490 | Not Available | Negative | 2972488 - 2973720 | 45120.9 |
| spermidine/putrescine abc transporter atp-binding protein pota | D5071_13495 | Not Available | Positive | 2974080 - 2975195 | 41899.3 |
| spermidine/putrescine abc transporter permease potb | D5071_13500 | Not Available | Positive | 2975179 - 2976039 | 32383.3 |
| spermidine/putrescine abc transporter permease potc | D5071_13505 | Not Available | Positive | 2976036 - 2976812 | 28620.2 |
| spermidine/putrescine abc transporter substrate-binding protein potd | D5071_13510 | Not Available | Positive | 2976902 - 2977945 | 38696.8 |
| methylated-dna--[protein]-cysteine s-methyltransferase | D5071_13515 | Not Available | Negative | 2978001 - 2978537 | 19146.1 |
| mfs transporter | D5071_13520 | Not Available | Negative | 2978657 - 2979883 | 43349.9 |
| arac family transcriptional regulator | D5071_13525 | Not Available | Positive | 2979990 - 2980847 | 32680.3 |
| ybhb/ybcl family raf kinase inhibitor-like protein | D5071_13530 | Not Available | Positive | 2981105 - 2981737 | 22626.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
