Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_13435 | Not Available | Negative | 2961612 - 2961863 | 9015.52 |
| hypothetical protein | D5071_13440 | Not Available | Positive | 2962071 - 2962757 | 26037.0 |
| nadp-dependent isocitrate dehydrogenase | D5071_13445 | Not Available | Negative | 2962893 - 2964146 | 45893.4 |
| 23s rrna pseudouridine(2457) synthase rlue | D5071_13450 | Not Available | Positive | 2964247 - 2964903 | 24980.4 |
| nudix hydrolase | D5071_13455 | Not Available | Positive | 2964896 - 2965342 | 17123.3 |
| trna 2-thiouridine(34) synthase mnma | D5071_13460 | Not Available | Positive | 2965487 - 2966593 | 41196.7 |
| lysogenization regulator hfld | D5071_13465 | Not Available | Positive | 2966596 - 2967234 | 22714.6 |
| adenylosuccinate lyase | D5071_13470 | Not Available | Positive | 2967383 - 2968753 | 51473.5 |
| two-component system response regulator phop | D5071_13475 | Not Available | Positive | 2969009 - 2969698 | 26050.7 |
| two-component system sensor histidine kinase phoq | D5071_13480 | Not Available | Positive | 2969695 - 2971149 | 54936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
