Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_13275 | Not Available | Negative | 2924127 - 2924429 | 11278.7 |
| restriction endonuclease | D5071_13280 | Not Available | Negative | 2924478 - 2925659 | 45299.5 |
| pd-(d/e)xk nuclease superfamily protein | D5071_13285 | Not Available | Negative | 2925746 - 2926891 | 43249.5 |
| hypothetical protein | D5071_13290 | Not Available | Negative | 2927061 - 2927486 | 16339.3 |
| gtp-binding protein | D5071_13305 | Not Available | Negative | 2928616 - 2929839 | 44867.3 |
| metal-binding protein zint | D5071_13310 | Not Available | Positive | 2930004 - 2930690 | 25925.4 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | D5071_13315 | Not Available | Negative | 2930800 - 2931186 | 13712.2 |
| histidinol-phosphatase | D5071_13320 | Not Available | Negative | 2931236 - 2932036 | 29369.2 |
| 6-phospho-beta-glucosidase | D5071_13325 | Not Available | Negative | 2932271 - 2933701 | 53713.5 |
| pts cellobiose/arbutin/salicin transporter subunit iibc | D5071_13330 | Not Available | Negative | 2933742 - 2935202 | 51365.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
