Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D5071_13225 | Not Available | Positive | 2911568 - 2912293 | 25975.3 |
| metal abc transporter permease | D5071_13230 | Not Available | Positive | 2912293 - 2913153 | 30282.7 |
| metal abc transporter substrate-binding protein | D5071_13235 | Not Available | Positive | 2913189 - 2914124 | 33317.6 |
| hypothetical protein | D5071_13240 | Not Available | Positive | 2914164 - 2915396 | 44119.3 |
| rhamnogalacturonan acetylesterase | D5071_13245 | Not Available | Negative | 2915531 - 2917387 | 66842.8 |
| hypothetical protein | D5071_13250 | Not Available | Negative | 2918031 - 2918612 | 22142.4 |
| hypothetical protein | D5071_13255 | Not Available | Negative | 2918724 - 2919452 | 27772.9 |
| hypothetical protein | D5071_13260 | Not Available | Negative | 2919445 - 2921340 | 74127.3 |
| hypothetical protein | D5071_13265 | Not Available | Negative | 2921309 - 2923396 | 77861.4 |
| hnh endonuclease | D5071_13270 | Not Available | Negative | 2923569 - 2924093 | 19785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
