Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | D5071_13170 | Not Available | Positive | 2900283 - 2901788 | 55921.4 |
| transcription modulator ydgt | D5071_13175 | Not Available | Positive | 2902061 - 2902276 | 8247.87 |
| electron transport complex subunit rsxa | D5071_13180 | Not Available | Positive | 2902516 - 2903097 | 21015.8 |
| electron transport complex subunit rsxb | D5071_13185 | Not Available | Positive | 2903097 - 2903675 | 20467.7 |
| electron transport complex subunit rsxc | D5071_13190 | Not Available | Positive | 2903668 - 2905752 | 74693.7 |
| electron transport complex subunit rsxd | D5071_13195 | Not Available | Positive | 2905753 - 2906808 | 38382.8 |
| electron transport complex subunit rsxg | D5071_13200 | Not Available | Positive | 2906819 - 2907448 | 22620.1 |
| electron transport complex subunit e | D5071_13205 | Not Available | Positive | 2907445 - 2908152 | 24699.9 |
| endonuclease iii | D5071_13210 | Not Available | Positive | 2908149 - 2908784 | 23513.6 |
| dipeptide/tripeptide permease dtpa | D5071_13215 | Not Available | Positive | 2909473 - 2910990 | 54767.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
