Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D5071_13070 | Not Available | Negative | 2873259 - 2874155 | 33347.7 |
| mfs transporter | D5071_13075 | Not Available | Positive | 2874270 - 2875538 | 45095.1 |
| hypothetical protein | D5071_13080 | Not Available | Negative | 2875675 - 2876139 | 17670.0 |
| class ii fumarate hydratase | D5071_13085 | Not Available | Negative | 2876414 - 2877811 | 50368.6 |
| mannose-6-phosphate isomerase | D5071_13090 | Not Available | Positive | 2878050 - 2879222 | 42882.1 |
| duf945 domain-containing protein | D5071_13095 | Not Available | Positive | 2879311 - 2880870 | 56039.2 |
| arsenic resistance protein | D5071_13100 | Not Available | Positive | 2880972 - 2881949 | 34863.2 |
| adenosine deaminase | D5071_13105 | Not Available | Positive | 2882071 - 2883084 | 37175.4 |
| hypothetical protein | D5071_13110 | Not Available | Negative | 2883164 - 2887060 | 148895.0 |
| bile acid:sodium symporter | D5071_13115 | Not Available | Negative | 2887654 - 2888634 | 35095.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
