Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | D5071_13020 | Not Available | Positive | 2859599 - 2860348 | 26754.0 |
| hypothetical protein | D5071_13025 | Not Available | Positive | 2860617 - 2866493 | 219703.0 |
| duf1283 family protein | D5071_13030 | Not Available | Positive | 2866795 - 2867145 | 13160.3 |
| hypothetical protein | D5071_13035 | Not Available | Positive | 2867320 - 2867937 | 22956.8 |
| duf1161 domain-containing protein | D5071_13040 | Not Available | Positive | 2868042 - 2868341 | 10215.0 |
| mfs transporter | D5071_13045 | Not Available | Negative | 2868402 - 2869889 | 53630.1 |
| atp-dependent dethiobiotin synthetase biod | D5071_13050 | Not Available | Negative | 2869992 - 2870657 | 23940.2 |
| rok family transcriptional regulator | D5071_13055 | Not Available | Negative | 2870791 - 2872008 | 44386.9 |
| hypothetical protein | D5071_13060 | Not Available | Positive | 2872115 - 2872345 | 8886.11 |
| hypothetical protein | D5071_13065 | Not Available | Positive | 2872562 - 2873224 | 25040.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
