Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threo-3-hydroxy-l-aspartate ammonia-lyase | D5071_12850 | Not Available | Negative | 2828388 - 2829362 | 34803.5 |
| transcriptional regulator | D5071_12855 | Not Available | Positive | 2829598 - 2830218 | 22189.6 |
| hypothetical protein | D5071_12860 | Not Available | Positive | 2831039 - 2831884 | 32556.0 |
| atp-binding protein | D5071_12865 | Not Available | Positive | 2832607 - 2834370 | 66357.7 |
| hypothetical protein | D5071_12870 | Not Available | Negative | 2834584 - 2834898 | 12005.8 |
| ygit-type zinc finger protein | D5071_12875 | Not Available | Negative | 2835230 - 2835439 | 7730.41 |
| stationary phase or stess regulating sigma factor | D5071_12880 | Not Available | Negative | 2835456 - 2836382 | 35464.5 |
| hypothetical protein | D5071_12885 | Not Available | Positive | 2836659 - 2837333 | 25527.3 |
| hypothetical protein | D5071_12895 | Not Available | Negative | 2838201 - 2838632 | 16223.0 |
| hypothetical protein | D5071_12900 | Not Available | Negative | 2838632 - 2840998 | 88976.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
