Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonopyruvate decarboxylase | D5071_12735 | Not Available | Negative | 2801211 - 2802320 | 38847.8 |
| phosphoenolpyruvate mutase | D5071_12740 | Not Available | Negative | 2802317 - 2803195 | 32096.4 |
| mfs transporter | D5071_12745 | Not Available | Positive | 2803526 - 2804755 | 44743.2 |
| sdr family oxidoreductase | D5071_12750 | Not Available | Positive | 2804761 - 2805510 | 26277.5 |
| gamma-glutamylcyclotransferase | D5071_12760 | Not Available | Positive | 2807034 - 2807717 | 25168.2 |
| duf481 domain-containing protein | D5071_12765 | Not Available | Negative | 2807798 - 2808838 | 38494.9 |
| acyltransferase | D5071_12770 | Not Available | Negative | 2809135 - 2810412 | 49233.8 |
| two-component system response regulator narl | D5071_12775 | Not Available | Negative | 2810687 - 2811337 | 23887.2 |
| nitrate/nitrite two-component system sensor histidine kinase narx | D5071_12780 | Not Available | Negative | 2811330 - 2813201 | 70761.4 |
| nark family nitrate/nitrite mfs transporter | D5071_12785 | Not Available | Positive | 2813475 - 2814863 | 50069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
