Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | D5071_00690 | Not Available | Positive | 130298 - 131371 | 38144.7 |
| efflux rnd transporter permease subunit | D5071_00695 | Not Available | Positive | 131368 - 134409 | 110320.0 |
| 3-oxoacyl-acp synthase | D5071_00700 | Not Available | Positive | 134406 - 135353 | 34884.8 |
| d-alanine--poly(phosphoribitol) ligase | D5071_00705 | Not Available | Positive | 135350 - 136948 | 59193.5 |
| hypothetical protein | D5071_00710 | Not Available | Positive | 136951 - 137871 | 33737.4 |
| hypothetical protein | D5071_00715 | Not Available | Positive | 137846 - 139426 | 57189.6 |
| alpha/beta hydrolase | D5071_00720 | Not Available | Positive | 139407 - 140339 | 33748.3 |
| hypothetical protein | D5071_00725 | Not Available | Positive | 140332 - 141258 | 35486.5 |
| 3-oxoacyl-acp synthase | D5071_00730 | Not Available | Positive | 141255 - 142187 | 34063.0 |
| hypothetical protein | D5071_00735 | Not Available | Positive | 142213 - 142521 | 11065.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
