Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltoporin | D5071_12475 | Not Available | Positive | 2741514 - 2742821 | 48883.5 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | D5071_12480 | Not Available | Negative | 2743405 - 2744487 | 39709.2 |
| extracellular solute-binding protein | D5071_12485 | Not Available | Positive | 2744979 - 2746211 | 44652.9 |
| sugar abc transporter permease | D5071_12490 | Not Available | Positive | 2746298 - 2747614 | 48640.3 |
| sugar abc transporter permease | D5071_12495 | Not Available | Positive | 2747627 - 2748475 | 31306.1 |
| galactosidase | D5071_12500 | Not Available | Positive | 2748511 - 2749725 | 44882.5 |
| beta-galactosidase | D5071_12505 | Not Available | Positive | 2749773 - 2751833 | 77682.5 |
| pts glucose transporter subunit iibc | D5071_12510 | Not Available | Positive | 2751985 - 2752326 | 12502.1 |
| aldo/keto reductase | D5071_12515 | Not Available | Negative | 2752727 - 2753692 | 35003.3 |
| nupc/nupg family nucleoside cnt transporter | D5071_12520 | Not Available | Positive | 2753957 - 2755147 | 42750.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
